Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.42■□□□□ 0.54
TOP1P11387 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TOP1P11387 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TOP1P11387 AC104640.1-201ENST00000562617 2109 ntBASIC18.41■□□□□ 0.54
TOP1P11387 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOP1P11387 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOP1P11387 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TOP1P11387 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.41■□□□□ 0.54
TOP1P11387 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TOP1P11387 CLK3P2-201ENST00000427566 1453 ntBASIC18.41■□□□□ 0.54
TOP1P11387 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TOP1P11387 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TOP1P11387 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TOP1P11387 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOP1P11387 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOP1P11387 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOP1P11387 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.41■□□□□ 0.54
TOP1P11387 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOP1P11387 AC098614.1-201ENST00000368528 745 ntBASIC18.41■□□□□ 0.54
TOP1P11387 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.41■□□□□ 0.54
TOP1P11387 ELK1P1-201ENST00000485699 580 ntBASIC18.41■□□□□ 0.54
TOP1P11387 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.41■□□□□ 0.54
TOP1P11387 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.41■□□□□ 0.54
TOP1P11387 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.41■□□□□ 0.54
TOP1P11387 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.41■□□□□ 0.54
TOP1P11387 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.41■□□□□ 0.54
TOP1P11387 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.41■□□□□ 0.54
TOP1P11387 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.41■□□□□ 0.54
TOP1P11387 AC063926.3-201ENST00000624734 5658 ntBASIC18.41■□□□□ 0.54
TOP1P11387 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TOP1P11387 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOP1P11387 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TOP1P11387 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOP1P11387 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TOP1P11387 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TOP1P11387 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.4■□□□□ 0.54
TOP1P11387 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
TOP1P11387 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TOP1P11387 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
TOP1P11387 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.4■□□□□ 0.54
TOP1P11387 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TOP1P11387 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.4■□□□□ 0.54
TOP1P11387 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 NME2P1-201ENST00000426182 414 ntBASIC18.4■□□□□ 0.54
TOP1P11387 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.4■□□□□ 0.54
TOP1P11387 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.4■□□□□ 0.54
TOP1P11387 AC104596.2-201ENST00000512793 793 ntBASIC18.4■□□□□ 0.54
TOP1P11387 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TOP1P11387 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.4■□□□□ 0.54
TOP1P11387 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.4■□□□□ 0.54
TOP1P11387 CTBP2P3-201ENST00000585629 1255 ntBASIC18.4■□□□□ 0.54
TOP1P11387 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.4■□□□□ 0.54
TOP1P11387 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.4■□□□□ 0.54
TOP1P11387 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.4■□□□□ 0.54
TOP1P11387 TMEM261P1-201ENST00000604899 340 ntBASIC18.4■□□□□ 0.54
TOP1P11387 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TOP1P11387 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
TOP1P11387 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.4■□□□□ 0.54
TOP1P11387 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.4■□□□□ 0.54
TOP1P11387 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TOP1P11387 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.4■□□□□ 0.54
TOP1P11387 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TOP1P11387 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
TOP1P11387 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TOP1P11387 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.4■□□□□ 0.54
TOP1P11387 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TOP1P11387 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TOP1P11387 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.39■□□□□ 0.54
TOP1P11387 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
TOP1P11387 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TOP1P11387 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
TOP1P11387 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TOP1P11387 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.39■□□□□ 0.53
TOP1P11387 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.39■□□□□ 0.53
TOP1P11387 AL513477.1-201ENST00000602865 2407 ntBASIC18.39■□□□□ 0.53
TOP1P11387 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms