Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.29□□□□□ -0.44
CD28P10747 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CD28P10747 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.29□□□□□ -0.44
CD28P10747 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
CD28P10747 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CD28P10747 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
CD28P10747 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CD28P10747 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CD28P10747 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CD28P10747 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.28□□□□□ -0.44
CD28P10747 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.28□□□□□ -0.44
CD28P10747 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.28□□□□□ -0.44
CD28P10747 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.28□□□□□ -0.44
CD28P10747 KRT43P-201ENST00000434019 910 ntBASIC12.28□□□□□ -0.44
CD28P10747 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 KRT223P-202ENST00000449164 1292 ntBASIC12.28□□□□□ -0.44
CD28P10747 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.28□□□□□ -0.44
CD28P10747 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.28□□□□□ -0.44
CD28P10747 SLED1-202ENST00000512051 380 ntBASIC12.28□□□□□ -0.44
CD28P10747 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.28□□□□□ -0.44
CD28P10747 TDH-203ENST00000531764 1110 ntBASIC12.28□□□□□ -0.44
CD28P10747 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
CD28P10747 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.28□□□□□ -0.44
CD28P10747 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.28□□□□□ -0.44
CD28P10747 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.28□□□□□ -0.44
CD28P10747 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.28□□□□□ -0.44
CD28P10747 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.28□□□□□ -0.44
CD28P10747 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.28□□□□□ -0.44
CD28P10747 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.28□□□□□ -0.44
CD28P10747 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.28□□□□□ -0.44
CD28P10747 MIR6799-201ENST00000620297 69 ntBASIC12.28□□□□□ -0.44
CD28P10747 RPSAP52-203ENST00000622976 1023 ntBASIC12.28□□□□□ -0.44
CD28P10747 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CD28P10747 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.28□□□□□ -0.44
CD28P10747 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CD28P10747 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
CD28P10747 AC018665.1-201ENST00000622927 1362 ntBASIC12.28□□□□□ -0.44
CD28P10747 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CD28P10747 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.28□□□□□ -0.44
CD28P10747 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
CD28P10747 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD28P10747 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
CD28P10747 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CD28P10747 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CD28P10747 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CD28P10747 AC006449.6-201ENST00000612330 2296 ntBASIC12.27□□□□□ -0.44
CD28P10747 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CD28P10747 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.27□□□□□ -0.44
CD28P10747 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CD28P10747 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CD28P10747 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.27□□□□□ -0.44
CD28P10747 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.27□□□□□ -0.44
CD28P10747 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.27□□□□□ -0.44
CD28P10747 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD28P10747 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CD28P10747 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.27□□□□□ -0.45
CD28P10747 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.27□□□□□ -0.45
CD28P10747 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
CD28P10747 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.27□□□□□ -0.45
CD28P10747 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.27□□□□□ -0.45
CD28P10747 TOMM22P5-201ENST00000416399 439 ntBASIC12.27□□□□□ -0.45
CD28P10747 AC134915.1-201ENST00000426461 574 ntBASIC12.27□□□□□ -0.45
CD28P10747 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD28P10747 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.27□□□□□ -0.45
CD28P10747 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CD28P10747 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.27□□□□□ -0.45
CD28P10747 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.27□□□□□ -0.45
CD28P10747 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.27□□□□□ -0.45
CD28P10747 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.27□□□□□ -0.45
CD28P10747 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.27□□□□□ -0.45
CD28P10747 USP32P1-208ENST00000506594 1164 ntBASIC12.27□□□□□ -0.45
CD28P10747 SLC25A47P1-201ENST00000531577 414 ntBASIC12.27□□□□□ -0.45
CD28P10747 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.27□□□□□ -0.45
CD28P10747 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.27□□□□□ -0.45
CD28P10747 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms