Protein–RNA interactions for Protein: P08559

PDHA1, Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1P08559 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDHA1P08559 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDHA1P08559 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDHA1P08559 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDHA1P08559 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.24■□□□□ 0.19
PDHA1P08559 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.24■□□□□ 0.19
PDHA1P08559 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.24■□□□□ 0.19
PDHA1P08559 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDHA1P08559 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDHA1P08559 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PDHA1P08559 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.24■□□□□ 0.19
PDHA1P08559 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.24■□□□□ 0.19
PDHA1P08559 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.24■□□□□ 0.19
PDHA1P08559 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.24■□□□□ 0.19
PDHA1P08559 MTND6P24-201ENST00000440466 518 ntBASIC16.24■□□□□ 0.19
PDHA1P08559 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.24■□□□□ 0.19
PDHA1P08559 KLF2P3-201ENST00000451977 1087 ntBASIC16.24■□□□□ 0.19
PDHA1P08559 AL139010.1-201ENST00000454878 894 ntBASIC16.24■□□□□ 0.19
PDHA1P08559 DUX4L27-201ENST00000554796 1261 ntBASIC16.24■□□□□ 0.19
PDHA1P08559 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
PDHA1P08559 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDHA1P08559 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PDHA1P08559 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDHA1P08559 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PDHA1P08559 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDHA1P08559 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.24■□□□□ 0.19
PDHA1P08559 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDHA1P08559 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDHA1P08559 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.24■□□□□ 0.19
PDHA1P08559 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDHA1P08559 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PDHA1P08559 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.23■□□□□ 0.19
PDHA1P08559 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.23■□□□□ 0.19
PDHA1P08559 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PDHA1P08559 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.23■□□□□ 0.19
PDHA1P08559 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.23■□□□□ 0.19
PDHA1P08559 AC069224.1-201ENST00000566372 1715 ntBASIC16.23■□□□□ 0.19
PDHA1P08559 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.23■□□□□ 0.19
PDHA1P08559 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
PDHA1P08559 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PDHA1P08559 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PDHA1P08559 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.23■□□□□ 0.19
PDHA1P08559 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PDHA1P08559 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PDHA1P08559 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.23■□□□□ 0.19
PDHA1P08559 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.23■□□□□ 0.19
PDHA1P08559 FAM86GP-201ENST00000448322 971 ntBASIC16.23■□□□□ 0.19
PDHA1P08559 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.23■□□□□ 0.19
PDHA1P08559 AC125807.1-201ENST00000483097 614 ntBASIC16.23■□□□□ 0.19
PDHA1P08559 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.23■□□□□ 0.19
PDHA1P08559 LINC02447-202ENST00000501888 2146 ntBASIC16.23■□□□□ 0.19
PDHA1P08559 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.23■□□□□ 0.19
PDHA1P08559 RFPL4AP1-201ENST00000530883 850 ntBASIC16.23■□□□□ 0.19
PDHA1P08559 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.23■□□□□ 0.19
PDHA1P08559 AC093512.1-201ENST00000617969 520 ntBASIC16.23■□□□□ 0.19
PDHA1P08559 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.23■□□□□ 0.19
PDHA1P08559 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PDHA1P08559 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.23■□□□□ 0.19
PDHA1P08559 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
PDHA1P08559 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.23■□□□□ 0.19
PDHA1P08559 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDHA1P08559 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PDHA1P08559 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDHA1P08559 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDHA1P08559 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDHA1P08559 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PDHA1P08559 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDHA1P08559 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDHA1P08559 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PDHA1P08559 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDHA1P08559 CYP4F24P-201ENST00000586049 1580 ntBASIC16.22■□□□□ 0.19
PDHA1P08559 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDHA1P08559 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PDHA1P08559 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.22■□□□□ 0.19
PDHA1P08559 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDHA1P08559 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDHA1P08559 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.22■□□□□ 0.19
PDHA1P08559 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.22■□□□□ 0.19
PDHA1P08559 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.22■□□□□ 0.19
PDHA1P08559 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDHA1P08559 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms