Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 AC140658.5-201ENST00000438532 169 ntBASIC14.18□□□□□ -0.14
HLA-DPB1P04440 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 AC093724.1-201ENST00000448659 1027 ntBASIC14.18□□□□□ -0.14
HLA-DPB1P04440 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 AL009183.1-201ENST00000603760 355 ntBASIC14.18□□□□□ -0.14
HLA-DPB1P04440 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 AC139749.1-202ENST00000617529 3139 ntBASIC14.18□□□□□ -0.14
HLA-DPB1P04440 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DPB1P04440 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 PMS2P4-201ENST00000412466 1052 ntBASIC14.17□□□□□ -0.14
HLA-DPB1P04440 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 AC002347.1-201ENST00000569543 541 ntBASIC14.17□□□□□ -0.14
HLA-DPB1P04440 MIR3909-201ENST00000579518 119 ntBASIC14.17□□□□□ -0.14
HLA-DPB1P04440 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DPB1P04440 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DPB1P04440 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms