Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.09■□□□□ 0.33
VTNP04004 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VTNP04004 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.09■□□□□ 0.33
VTNP04004 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
VTNP04004 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 RPL7P3-201ENST00000441388 714 ntBASIC17.09■□□□□ 0.33
VTNP04004 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.09■□□□□ 0.33
VTNP04004 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.09■□□□□ 0.33
VTNP04004 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.09■□□□□ 0.33
VTNP04004 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 REXO1L6P-201ENST00000603433 1515 ntBASIC17.09■□□□□ 0.33
VTNP04004 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 AC022188.1-201ENST00000620960 1664 ntBASIC17.09■□□□□ 0.33
VTNP04004 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
VTNP04004 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 CICP13-201ENST00000422015 2789 ntBASIC17.09■□□□□ 0.33
VTNP04004 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
VTNP04004 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VTNP04004 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
VTNP04004 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VTNP04004 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.08■□□□□ 0.33
VTNP04004 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.08■□□□□ 0.33
VTNP04004 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VTNP04004 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
VTNP04004 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
VTNP04004 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VTNP04004 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTNP04004 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTNP04004 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTNP04004 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTNP04004 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTNP04004 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.08■□□□□ 0.32
VTNP04004 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VTNP04004 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTNP04004 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTNP04004 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTNP04004 ACKR1-201ENST00000368121 1240 ntBASIC17.08■□□□□ 0.32
VTNP04004 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.08■□□□□ 0.32
VTNP04004 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.08■□□□□ 0.32
VTNP04004 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.08■□□□□ 0.32
VTNP04004 GNRHR2-203ENST00000581100 1187 ntBASIC17.08■□□□□ 0.32
VTNP04004 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.08■□□□□ 0.32
VTNP04004 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.08■□□□□ 0.32
VTNP04004 MIR6799-201ENST00000620297 69 ntBASIC17.08■□□□□ 0.32
VTNP04004 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.08■□□□□ 0.32
VTNP04004 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VTNP04004 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
VTNP04004 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
VTNP04004 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
VTNP04004 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VTNP04004 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 AC127383.1-201ENST00000444697 1800 ntBASIC17.07■□□□□ 0.32
VTNP04004 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
VTNP04004 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.07■□□□□ 0.32
VTNP04004 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
VTNP04004 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.07■□□□□ 0.32
VTNP04004 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.07■□□□□ 0.32
VTNP04004 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
VTNP04004 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
VTNP04004 AC016694.1-201ENST00000434179 700 ntBASIC17.07■□□□□ 0.32
VTNP04004 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.07■□□□□ 0.32
VTNP04004 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.07■□□□□ 0.32
VTNP04004 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.07■□□□□ 0.32
VTNP04004 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.07■□□□□ 0.32
VTNP04004 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.07■□□□□ 0.32
VTNP04004 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.07■□□□□ 0.32
VTNP04004 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.07■□□□□ 0.32
VTNP04004 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
VTNP04004 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 AL391005.1-201ENST00000623953 2435 ntBASIC17.07■□□□□ 0.32
VTNP04004 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.07■□□□□ 0.32
VTNP04004 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
VTNP04004 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms