Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRBV12-3P01733 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 SPDYE19P-201ENST00000338590 713 ntBASIC12.13□□□□□ -0.47
TRBV12-3P01733 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRBV12-3P01733 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRBV12-3P01733 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRBV12-3P01733 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRBV12-3P01733 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRBV12-3P01733 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 DOC2GP-202ENST00000514950 1163 ntBASIC12.13□□□□□ -0.47
TRBV12-3P01733 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 TIMM17BP1-201ENST00000545713 516 ntBASIC12.13□□□□□ -0.47
TRBV12-3P01733 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRBV12-3P01733 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 LINC02560-201ENST00000596379 459 ntBASIC12.13□□□□□ -0.47
TRBV12-3P01733 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRBV12-3P01733 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRBV12-3P01733 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRBV12-3P01733 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRBV12-3P01733 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRBV12-3P01733 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRBV12-3P01733 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRBV12-3P01733 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRBV12-3P01733 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRBV12-3P01733 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRBV12-3P01733 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.13□□□□□ -0.47
TRBV12-3P01733 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 AC002472.2-201ENST00000442739 958 ntBASIC12.12□□□□□ -0.47
TRBV12-3P01733 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 AC092337.1-201ENST00000568699 1129 ntBASIC12.12□□□□□ -0.47
TRBV12-3P01733 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 AC073347.1-201ENST00000421633 2643 ntBASIC12.12□□□□□ -0.47
TRBV12-3P01733 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 AC020658.6-201ENST00000623564 1870 ntBASIC12.12□□□□□ -0.47
TRBV12-3P01733 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.12□□□□□ -0.47
TRBV12-3P01733 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 SSR4P1-203ENST00000599569 2260 ntBASIC12.12□□□□□ -0.47
TRBV12-3P01733 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRBV12-3P01733 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms