Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.56■□□□□ 0.24
RTN3O95197 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN3O95197 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN3O95197 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN3O95197 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN3O95197 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN3O95197 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RTN3O95197 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN3O95197 COX5BP8-201ENST00000416911 349 ntBASIC16.56■□□□□ 0.24
RTN3O95197 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.56■□□□□ 0.24
RTN3O95197 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.56■□□□□ 0.24
RTN3O95197 KRT18P64-201ENST00000434946 1219 ntBASIC16.56■□□□□ 0.24
RTN3O95197 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.56■□□□□ 0.24
RTN3O95197 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.56■□□□□ 0.24
RTN3O95197 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.56■□□□□ 0.24
RTN3O95197 RN7SL399P-201ENST00000471648 279 ntBASIC16.56■□□□□ 0.24
RTN3O95197 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RTN3O95197 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RTN3O95197 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.56■□□□□ 0.24
RTN3O95197 TMEM261P1-201ENST00000604899 340 ntBASIC16.56■□□□□ 0.24
RTN3O95197 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.56■□□□□ 0.24
RTN3O95197 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.56■□□□□ 0.24
RTN3O95197 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.56■□□□□ 0.24
RTN3O95197 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN3O95197 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN3O95197 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN3O95197 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.56■□□□□ 0.24
RTN3O95197 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
RTN3O95197 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
RTN3O95197 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.56■□□□□ 0.24
RTN3O95197 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN3O95197 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTN3O95197 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.55■□□□□ 0.24
RTN3O95197 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.55■□□□□ 0.24
RTN3O95197 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RTN3O95197 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RTN3O95197 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTN3O95197 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.55■□□□□ 0.24
RTN3O95197 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.55■□□□□ 0.24
RTN3O95197 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTN3O95197 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN3O95197 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.55■□□□□ 0.24
RTN3O95197 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN3O95197 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN3O95197 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RTN3O95197 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.55■□□□□ 0.24
RTN3O95197 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.55■□□□□ 0.24
RTN3O95197 AC011495.1-201ENST00000498085 584 ntBASIC16.55■□□□□ 0.24
RTN3O95197 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RTN3O95197 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.55■□□□□ 0.24
RTN3O95197 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.55■□□□□ 0.24
RTN3O95197 WASH4P-201ENST00000564273 1246 ntBASIC16.55■□□□□ 0.24
RTN3O95197 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.55■□□□□ 0.24
RTN3O95197 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RTN3O95197 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.55■□□□□ 0.24
RTN3O95197 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.55■□□□□ 0.24
RTN3O95197 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN3O95197 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN3O95197 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN3O95197 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN3O95197 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.55■□□□□ 0.24
RTN3O95197 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.55■□□□□ 0.24
RTN3O95197 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
RTN3O95197 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN3O95197 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RTN3O95197 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN3O95197 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RTN3O95197 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTN3O95197 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTN3O95197 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RTN3O95197 CLK3P2-201ENST00000427566 1453 ntBASIC16.54■□□□□ 0.24
RTN3O95197 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RTN3O95197 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN3O95197 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN3O95197 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.54■□□□□ 0.24
RTN3O95197 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN3O95197 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.54■□□□□ 0.24
RTN3O95197 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN3O95197 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN3O95197 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RTN3O95197 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN3O95197 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTN3O95197 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN3O95197 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.54■□□□□ 0.24
RTN3O95197 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN3O95197 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.54■□□□□ 0.24
RTN3O95197 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.54■□□□□ 0.24
RTN3O95197 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.54■□□□□ 0.24
RTN3O95197 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.54■□□□□ 0.24
RTN3O95197 ELK1P1-201ENST00000485699 580 ntBASIC16.54■□□□□ 0.24
RTN3O95197 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.54■□□□□ 0.24
RTN3O95197 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
RTN3O95197 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN3O95197 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.54■□□□□ 0.24
RTN3O95197 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN3O95197 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.54■□□□□ 0.24
RTN3O95197 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN3O95197 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTN3O95197 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTN3O95197 AL513523.2-202ENST00000427283 2040 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms