Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST1O76090 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST1O76090 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST1O76090 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST1O76090 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BEST1O76090 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST1O76090 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST1O76090 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.37■□□□□ 0.21
BEST1O76090 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST1O76090 C1QBPP1-201ENST00000400117 770 ntBASIC16.37■□□□□ 0.21
BEST1O76090 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.37■□□□□ 0.21
BEST1O76090 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
BEST1O76090 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.37■□□□□ 0.21
BEST1O76090 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.37■□□□□ 0.21
BEST1O76090 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.37■□□□□ 0.21
BEST1O76090 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.37■□□□□ 0.21
BEST1O76090 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BEST1O76090 CU634019.7-201ENST00000624153 1185 ntBASIC16.37■□□□□ 0.21
BEST1O76090 FP236241.2-201ENST00000624906 1185 ntBASIC16.37■□□□□ 0.21
BEST1O76090 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.37■□□□□ 0.21
BEST1O76090 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST1O76090 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST1O76090 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.37■□□□□ 0.21
BEST1O76090 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.37■□□□□ 0.21
BEST1O76090 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST1O76090 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
BEST1O76090 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BEST1O76090 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
BEST1O76090 SSR4P1-203ENST00000599569 2260 ntBASIC16.36■□□□□ 0.21
BEST1O76090 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.36■□□□□ 0.21
BEST1O76090 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.36■□□□□ 0.21
BEST1O76090 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST1O76090 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.36■□□□□ 0.21
BEST1O76090 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
BEST1O76090 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST1O76090 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST1O76090 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BEST1O76090 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST1O76090 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.36■□□□□ 0.21
BEST1O76090 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.36■□□□□ 0.21
BEST1O76090 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.36■□□□□ 0.21
BEST1O76090 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.36■□□□□ 0.21
BEST1O76090 RPL13AP25-201ENST00000484130 612 ntBASIC16.36■□□□□ 0.21
BEST1O76090 GIMAP3P-201ENST00000495150 836 ntBASIC16.36■□□□□ 0.21
BEST1O76090 AC011495.1-201ENST00000498085 584 ntBASIC16.36■□□□□ 0.21
BEST1O76090 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.36■□□□□ 0.21
BEST1O76090 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BEST1O76090 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.36■□□□□ 0.21
BEST1O76090 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.36■□□□□ 0.21
BEST1O76090 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.36■□□□□ 0.21
BEST1O76090 AC010319.3-201ENST00000597028 470 ntBASIC16.36■□□□□ 0.21
BEST1O76090 AC239800.4-201ENST00000603712 296 ntBASIC16.36■□□□□ 0.21
BEST1O76090 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST1O76090 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
BEST1O76090 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST1O76090 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST1O76090 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST1O76090 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.36■□□□□ 0.21
BEST1O76090 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
BEST1O76090 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BEST1O76090 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BEST1O76090 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.36■□□□□ 0.21
BEST1O76090 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
BEST1O76090 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.36■□□□□ 0.21
BEST1O76090 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BEST1O76090 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BEST1O76090 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BEST1O76090 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BEST1O76090 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
BEST1O76090 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BEST1O76090 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
BEST1O76090 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BEST1O76090 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.35■□□□□ 0.21
BEST1O76090 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.35■□□□□ 0.21
BEST1O76090 CICP6-201ENST00000457191 2729 ntBASIC16.35■□□□□ 0.21
BEST1O76090 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BEST1O76090 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.35■□□□□ 0.21
BEST1O76090 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.35■□□□□ 0.21
BEST1O76090 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BEST1O76090 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
BEST1O76090 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
BEST1O76090 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BEST1O76090 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
BEST1O76090 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BEST1O76090 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
BEST1O76090 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.35■□□□□ 0.21
BEST1O76090 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
BEST1O76090 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BEST1O76090 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
BEST1O76090 KRT17P7-201ENST00000451704 1104 ntBASIC16.35■□□□□ 0.21
BEST1O76090 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.35■□□□□ 0.21
BEST1O76090 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.35■□□□□ 0.21
BEST1O76090 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.35■□□□□ 0.21
BEST1O76090 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.35■□□□□ 0.21
BEST1O76090 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.35■□□□□ 0.21
BEST1O76090 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.35■□□□□ 0.21
BEST1O76090 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.35■□□□□ 0.21
BEST1O76090 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.35■□□□□ 0.21
BEST1O76090 CLUHP6-201ENST00000580789 941 ntBASIC16.35■□□□□ 0.21
BEST1O76090 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms