Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.35□□□□□ -0.11
CLPXO76031 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLPXO76031 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLPXO76031 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.35□□□□□ -0.11
CLPXO76031 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLPXO76031 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLPXO76031 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLPXO76031 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.35□□□□□ -0.11
CLPXO76031 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CLPXO76031 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLPXO76031 PMPCAP1-201ENST00000508114 1576 ntBASIC14.34□□□□□ -0.11
CLPXO76031 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.34□□□□□ -0.11
CLPXO76031 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CLPXO76031 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.34□□□□□ -0.11
CLPXO76031 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.34□□□□□ -0.11
CLPXO76031 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLPXO76031 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLPXO76031 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CLPXO76031 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.34□□□□□ -0.11
CLPXO76031 CR383656.2-201ENST00000548656 2254 ntBASIC14.34□□□□□ -0.11
CLPXO76031 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.34□□□□□ -0.11
CLPXO76031 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
CLPXO76031 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLPXO76031 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.34□□□□□ -0.11
CLPXO76031 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLPXO76031 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLPXO76031 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.34□□□□□ -0.11
CLPXO76031 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLPXO76031 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLPXO76031 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CLPXO76031 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.34□□□□□ -0.11
CLPXO76031 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLPXO76031 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.34□□□□□ -0.11
CLPXO76031 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLPXO76031 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.34□□□□□ -0.11
CLPXO76031 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.34□□□□□ -0.11
CLPXO76031 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLPXO76031 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.34□□□□□ -0.11
CLPXO76031 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.34□□□□□ -0.11
CLPXO76031 TERC-201ENST00000602385 541 ntBASIC14.34□□□□□ -0.11
CLPXO76031 AC020765.3-201ENST00000613051 740 ntBASIC14.34□□□□□ -0.11
CLPXO76031 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.34□□□□□ -0.11
CLPXO76031 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLPXO76031 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLPXO76031 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CLPXO76031 AC005622.1-201ENST00000636801 1703 ntBASIC14.34□□□□□ -0.11
CLPXO76031 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLPXO76031 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLPXO76031 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLPXO76031 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLPXO76031 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
CLPXO76031 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLPXO76031 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLPXO76031 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLPXO76031 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLPXO76031 AC243591.1-201ENST00000452967 1364 ntBASIC14.34□□□□□ -0.11
CLPXO76031 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLPXO76031 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.33□□□□□ -0.11
CLPXO76031 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLPXO76031 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.33□□□□□ -0.11
CLPXO76031 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.33□□□□□ -0.11
CLPXO76031 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.33□□□□□ -0.11
CLPXO76031 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CLPXO76031 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLPXO76031 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLPXO76031 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.33□□□□□ -0.12
CLPXO76031 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CLPXO76031 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLPXO76031 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLPXO76031 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLPXO76031 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLPXO76031 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLPXO76031 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.33□□□□□ -0.12
CLPXO76031 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.33□□□□□ -0.12
CLPXO76031 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLPXO76031 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.33□□□□□ -0.12
CLPXO76031 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
CLPXO76031 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.33□□□□□ -0.12
CLPXO76031 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLPXO76031 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.33□□□□□ -0.12
CLPXO76031 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.33□□□□□ -0.12
CLPXO76031 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.33□□□□□ -0.12
CLPXO76031 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.33□□□□□ -0.12
CLPXO76031 RBM17P3-201ENST00000417687 1192 ntBASIC14.33□□□□□ -0.12
CLPXO76031 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.33□□□□□ -0.12
CLPXO76031 AF238378.1-201ENST00000526806 358 ntBASIC14.33□□□□□ -0.12
CLPXO76031 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.33□□□□□ -0.12
CLPXO76031 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.33□□□□□ -0.12
CLPXO76031 AP001269.4-201ENST00000609611 512 ntBASIC14.33□□□□□ -0.12
CLPXO76031 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLPXO76031 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.33□□□□□ -0.12
CLPXO76031 AP000867.4-201ENST00000641616 219 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms