Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 CICP6-201ENST00000457191 2729 ntBASIC15.84■□□□□ 0.13
PRAMEF11O60813 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEF11O60813 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEF11O60813 PPT1-215ENST00000641471 2368 ntBASIC15.84■□□□□ 0.13
PRAMEF11O60813 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEF11O60813 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.84■□□□□ 0.13
PRAMEF11O60813 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRAMEF11O60813 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.84■□□□□ 0.13
PRAMEF11O60813 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PRAMEF11O60813 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PRAMEF11O60813 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.83■□□□□ 0.13
PRAMEF11O60813 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.83■□□□□ 0.13
PRAMEF11O60813 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.13
PRAMEF11O60813 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRAMEF11O60813 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRAMEF11O60813 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRAMEF11O60813 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRAMEF11O60813 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
PRAMEF11O60813 AC022532.1-201ENST00000624563 1728 ntBASIC15.83■□□□□ 0.13
PRAMEF11O60813 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 C18orf15-201ENST00000623680 2534 ntBASIC15.83■□□□□ 0.12
PRAMEF11O60813 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 ELK1P1-201ENST00000485699 580 ntBASIC15.83■□□□□ 0.12
PRAMEF11O60813 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 GAPDHP40-201ENST00000505218 1006 ntBASIC15.83■□□□□ 0.12
PRAMEF11O60813 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PRAMEF11O60813 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRAMEF11O60813 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 AL442647.2-201ENST00000429864 857 ntBASIC15.82■□□□□ 0.12
PRAMEF11O60813 VDAC1P7-201ENST00000462417 847 ntBASIC15.82■□□□□ 0.12
PRAMEF11O60813 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 RPL13AP25-201ENST00000484130 612 ntBASIC15.82■□□□□ 0.12
PRAMEF11O60813 AC026410.3-201ENST00000514280 936 ntBASIC15.82■□□□□ 0.12
PRAMEF11O60813 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 WASH4P-201ENST00000564273 1246 ntBASIC15.82■□□□□ 0.12
PRAMEF11O60813 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 DRD5P1-201ENST00000456605 1438 ntBASIC15.82■□□□□ 0.12
PRAMEF11O60813 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms