Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.59■□□□□ 0.41
ACTN4O43707 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.59■□□□□ 0.41
ACTN4O43707 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.59■□□□□ 0.41
ACTN4O43707 RPL37AP1-201ENST00000412502 279 ntBASIC17.59■□□□□ 0.41
ACTN4O43707 SPDYE7P-202ENST00000420373 878 ntBASIC17.59■□□□□ 0.41
ACTN4O43707 KRT18P64-201ENST00000434946 1219 ntBASIC17.59■□□□□ 0.41
ACTN4O43707 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.59■□□□□ 0.41
ACTN4O43707 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.59■□□□□ 0.41
ACTN4O43707 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.59■□□□□ 0.41
ACTN4O43707 AC092865.5-201ENST00000545435 363 ntBASIC17.59■□□□□ 0.41
ACTN4O43707 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.59■□□□□ 0.41
ACTN4O43707 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.59■□□□□ 0.41
ACTN4O43707 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ACTN4O43707 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ACTN4O43707 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ACTN4O43707 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ACTN4O43707 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ACTN4O43707 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.58■□□□□ 0.41
ACTN4O43707 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ACTN4O43707 Z97205.2-201ENST00000564697 1639 ntBASIC17.58■□□□□ 0.41
ACTN4O43707 AC099063.4-201ENST00000641099 1602 ntBASIC17.58■□□□□ 0.41
ACTN4O43707 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.58■□□□□ 0.41
ACTN4O43707 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ACTN4O43707 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ACTN4O43707 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ACTN4O43707 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ACTN4O43707 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ACTN4O43707 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ACTN4O43707 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ACTN4O43707 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ACTN4O43707 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ACTN4O43707 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ACTN4O43707 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.58■□□□□ 0.4
ACTN4O43707 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.58■□□□□ 0.4
ACTN4O43707 AC109322.1-201ENST00000524499 1264 ntBASIC17.58■□□□□ 0.4
ACTN4O43707 AC069262.1-201ENST00000539058 672 ntBASIC17.58■□□□□ 0.4
ACTN4O43707 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.58■□□□□ 0.4
ACTN4O43707 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.58■□□□□ 0.4
ACTN4O43707 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ACTN4O43707 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ACTN4O43707 AC025048.3-201ENST00000590609 569 ntBASIC17.58■□□□□ 0.4
ACTN4O43707 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.58■□□□□ 0.4
ACTN4O43707 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.58■□□□□ 0.4
ACTN4O43707 AC005702.4-201ENST00000618393 416 ntBASIC17.58■□□□□ 0.4
ACTN4O43707 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ACTN4O43707 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ACTN4O43707 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ACTN4O43707 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ACTN4O43707 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ACTN4O43707 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ACTN4O43707 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.58■□□□□ 0.4
ACTN4O43707 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.58■□□□□ 0.4
ACTN4O43707 MROH4P-201ENST00000431302 1578 ntBASIC17.57■□□□□ 0.4
ACTN4O43707 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACTN4O43707 CICP11-201ENST00000434745 2827 ntBASIC17.57■□□□□ 0.4
ACTN4O43707 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ACTN4O43707 CETN4P-206ENST00000642099 2168 ntBASIC17.57■□□□□ 0.4
ACTN4O43707 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
ACTN4O43707 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACTN4O43707 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACTN4O43707 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACTN4O43707 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACTN4O43707 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
ACTN4O43707 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ACTN4O43707 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.57■□□□□ 0.4
ACTN4O43707 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACTN4O43707 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACTN4O43707 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ACTN4O43707 AL139400.1-201ENST00000366220 510 ntBASIC17.57■□□□□ 0.4
ACTN4O43707 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACTN4O43707 RPL5P21-201ENST00000404620 815 ntBASIC17.57■□□□□ 0.4
ACTN4O43707 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.57■□□□□ 0.4
ACTN4O43707 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.57■□□□□ 0.4
ACTN4O43707 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
ACTN4O43707 HLA-J-203ENST00000494367 1087 ntBASIC17.57■□□□□ 0.4
ACTN4O43707 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ACTN4O43707 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.57■□□□□ 0.4
ACTN4O43707 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.57■□□□□ 0.4
ACTN4O43707 LINC00628-201ENST00000628516 1289 ntBASIC17.57■□□□□ 0.4
ACTN4O43707 AL033527.5-202ENST00000641632 1098 ntBASIC17.57■□□□□ 0.4
ACTN4O43707 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ACTN4O43707 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ACTN4O43707 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms