Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
SGCEO43556 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SGCEO43556 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SGCEO43556 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SGCEO43556 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.97□□□□□ -0.17
SGCEO43556 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SGCEO43556 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SGCEO43556 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SGCEO43556 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SGCEO43556 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.97□□□□□ -0.17
SGCEO43556 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SGCEO43556 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SGCEO43556 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SGCEO43556 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SGCEO43556 AL035456.1-201ENST00000456064 1369 ntBASIC13.96□□□□□ -0.17
SGCEO43556 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.96□□□□□ -0.17
SGCEO43556 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SGCEO43556 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
SGCEO43556 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SGCEO43556 AC138035.3-201ENST00000622706 2791 ntBASIC13.96□□□□□ -0.17
SGCEO43556 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SGCEO43556 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.96□□□□□ -0.17
SGCEO43556 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SGCEO43556 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SGCEO43556 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SGCEO43556 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SGCEO43556 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SGCEO43556 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SGCEO43556 AC018892.3-201ENST00000623986 2499 ntBASIC13.96□□□□□ -0.17
SGCEO43556 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
SGCEO43556 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SGCEO43556 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SGCEO43556 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.96□□□□□ -0.17
SGCEO43556 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SGCEO43556 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
SGCEO43556 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SGCEO43556 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.96□□□□□ -0.17
SGCEO43556 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SGCEO43556 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.96□□□□□ -0.17
SGCEO43556 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
SGCEO43556 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.96□□□□□ -0.17
SGCEO43556 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
SGCEO43556 AL450472.2-201ENST00000603663 1156 ntBASIC13.96□□□□□ -0.17
SGCEO43556 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.96□□□□□ -0.17
SGCEO43556 AC023511.2-201ENST00000618803 211 ntBASIC13.96□□□□□ -0.17
SGCEO43556 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SGCEO43556 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.96□□□□□ -0.17
SGCEO43556 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SGCEO43556 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SGCEO43556 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SGCEO43556 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.96□□□□□ -0.18
SGCEO43556 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SGCEO43556 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
SGCEO43556 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SGCEO43556 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SGCEO43556 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
SGCEO43556 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SGCEO43556 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SGCEO43556 AL137784.3-201ENST00000623858 2288 ntBASIC13.95□□□□□ -0.18
SGCEO43556 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.95□□□□□ -0.18
SGCEO43556 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.95□□□□□ -0.18
SGCEO43556 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SGCEO43556 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.95□□□□□ -0.18
SGCEO43556 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SGCEO43556 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.95□□□□□ -0.18
SGCEO43556 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.95□□□□□ -0.18
SGCEO43556 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SGCEO43556 EEF1DP4-201ENST00000446006 880 ntBASIC13.95□□□□□ -0.18
SGCEO43556 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.95□□□□□ -0.18
SGCEO43556 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.95□□□□□ -0.18
SGCEO43556 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.95□□□□□ -0.18
SGCEO43556 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
SGCEO43556 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.95□□□□□ -0.18
SGCEO43556 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.95□□□□□ -0.18
SGCEO43556 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.95□□□□□ -0.18
SGCEO43556 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.95□□□□□ -0.18
SGCEO43556 MIR4453-201ENST00000584019 89 ntBASIC13.95□□□□□ -0.18
SGCEO43556 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 AC027612.4-201ENST00000605371 583 ntBASIC13.95□□□□□ -0.18
SGCEO43556 AL691403.2-201ENST00000618460 490 ntBASIC13.95□□□□□ -0.18
SGCEO43556 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.95□□□□□ -0.18
SGCEO43556 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SGCEO43556 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms