Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MID1O15344 LINC02199-201ENST00000506655 2702 ntBASIC15.67■□□□□ 0.1
MID1O15344 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.66■□□□□ 0.1
MID1O15344 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.66■□□□□ 0.1
MID1O15344 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
MID1O15344 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
MID1O15344 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.66■□□□□ 0.1
MID1O15344 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
MID1O15344 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.66■□□□□ 0.1
MID1O15344 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
MID1O15344 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 BNIP3P42-201ENST00000454982 569 ntBASIC15.66■□□□□ 0.1
MID1O15344 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.66■□□□□ 0.1
MID1O15344 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.66■□□□□ 0.1
MID1O15344 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
MID1O15344 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.66■□□□□ 0.1
MID1O15344 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.66■□□□□ 0.1
MID1O15344 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.66■□□□□ 0.1
MID1O15344 BNIP3P29-201ENST00000598302 571 ntBASIC15.66■□□□□ 0.1
MID1O15344 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.66■□□□□ 0.1
MID1O15344 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.66■□□□□ 0.1
MID1O15344 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.66■□□□□ 0.1
MID1O15344 AC011447.5-201ENST00000616168 564 ntBASIC15.66■□□□□ 0.1
MID1O15344 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.66■□□□□ 0.1
MID1O15344 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.66■□□□□ 0.1
MID1O15344 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
MID1O15344 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
MID1O15344 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.65■□□□□ 0.1
MID1O15344 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
MID1O15344 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.65■□□□□ 0.1
MID1O15344 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
MID1O15344 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.65■□□□□ 0.1
MID1O15344 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.65■□□□□ 0.1
MID1O15344 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
MID1O15344 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.65■□□□□ 0.1
MID1O15344 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.65■□□□□ 0.1
MID1O15344 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.65■□□□□ 0.1
MID1O15344 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.65■□□□□ 0.1
MID1O15344 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
MID1O15344 AC012441.1-201ENST00000446669 685 ntBASIC15.65■□□□□ 0.1
MID1O15344 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.65■□□□□ 0.1
MID1O15344 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 AP001582.1-201ENST00000525856 295 ntBASIC15.65■□□□□ 0.1
MID1O15344 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
MID1O15344 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.65■□□□□ 0.1
MID1O15344 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.65■□□□□ 0.1
MID1O15344 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.65■□□□□ 0.1
MID1O15344 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.65■□□□□ 0.1
MID1O15344 AC093813.1-201ENST00000605066 256 ntBASIC15.65■□□□□ 0.1
MID1O15344 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
MID1O15344 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 AC112504.1-201ENST00000623415 1841 ntBASIC15.65■□□□□ 0.1
MID1O15344 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.65■□□□□ 0.1
MID1O15344 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
MID1O15344 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.65■□□□□ 0.1
MID1O15344 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.65■□□□□ 0.1
MID1O15344 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
MID1O15344 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
MID1O15344 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.1
MID1O15344 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
MID1O15344 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.64■□□□□ 0.09
MID1O15344 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.64■□□□□ 0.09
MID1O15344 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
MID1O15344 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
MID1O15344 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms