Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 UGT1A2P-201ENST00000454886 866 ntBASIC16.74■□□□□ 0.27
O00370 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.74■□□□□ 0.27
O00370 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.74■□□□□ 0.27
O00370 SLED1-202ENST00000512051 380 ntBASIC16.74■□□□□ 0.27
O00370 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
O00370 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.74■□□□□ 0.27
O00370 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.74■□□□□ 0.27
O00370 AC004461.2-201ENST00000629517 803 ntBASIC16.74■□□□□ 0.27
O00370 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
O00370 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 AC105250.1-201ENST00000509378 2057 ntBASIC16.74■□□□□ 0.27
O00370 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.74■□□□□ 0.27
O00370 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.74■□□□□ 0.27
O00370 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.74■□□□□ 0.27
O00370 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.73■□□□□ 0.27
O00370 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.73■□□□□ 0.27
O00370 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.73■□□□□ 0.27
O00370 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.73■□□□□ 0.27
O00370 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
O00370 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.73■□□□□ 0.27
O00370 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.73■□□□□ 0.27
O00370 AC090616.6-203ENST00000579186 1945 ntBASIC16.73■□□□□ 0.27
O00370 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
O00370 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.73■□□□□ 0.27
O00370 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.73■□□□□ 0.27
O00370 INGX-202ENST00000489074 768 ntBASIC16.73■□□□□ 0.27
O00370 SPDYE18-201ENST00000510091 1050 ntBASIC16.73■□□□□ 0.27
O00370 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.73■□□□□ 0.27
O00370 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
O00370 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.73■□□□□ 0.27
O00370 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.73■□□□□ 0.27
O00370 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.73■□□□□ 0.27
O00370 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.73■□□□□ 0.27
O00370 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.73■□□□□ 0.27
O00370 AF228730.6-201ENST00000641497 218 ntBASIC16.73■□□□□ 0.27
O00370 AC084121.3-201ENST00000641716 218 ntBASIC16.73■□□□□ 0.27
O00370 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
O00370 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.73■□□□□ 0.27
O00370 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.73■□□□□ 0.27
O00370 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.73■□□□□ 0.27
O00370 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
O00370 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
O00370 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
O00370 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.72■□□□□ 0.27
O00370 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
O00370 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
O00370 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
O00370 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
O00370 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
O00370 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
O00370 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.72■□□□□ 0.27
O00370 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
O00370 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
O00370 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
O00370 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.72■□□□□ 0.27
O00370 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.72■□□□□ 0.27
O00370 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
O00370 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.72■□□□□ 0.27
O00370 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.72■□□□□ 0.27
O00370 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.72■□□□□ 0.27
O00370 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.72■□□□□ 0.27
O00370 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
O00370 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
O00370 AC127383.1-201ENST00000444697 1800 ntBASIC16.72■□□□□ 0.27
O00370 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
O00370 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
O00370 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
O00370 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
O00370 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms