Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 AC126365.1-201ENST00000578585 1514 ntBASIC16.34■□□□□ 0.21
SRRM3A6NNA2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.34■□□□□ 0.21
SRRM3A6NNA2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRRM3A6NNA2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SRRM3A6NNA2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.33■□□□□ 0.21
SRRM3A6NNA2 AC148477.4-201ENST00000613430 1793 ntBASIC16.33■□□□□ 0.21
SRRM3A6NNA2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRRM3A6NNA2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRRM3A6NNA2 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRRM3A6NNA2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SRRM3A6NNA2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.33■□□□□ 0.21
SRRM3A6NNA2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRRM3A6NNA2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SRRM3A6NNA2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRRM3A6NNA2 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
SRRM3A6NNA2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
SRRM3A6NNA2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRRM3A6NNA2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.33■□□□□ 0.21
SRRM3A6NNA2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.33■□□□□ 0.21
SRRM3A6NNA2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 GPS2P2-201ENST00000430745 888 ntBASIC16.33■□□□□ 0.2
SRRM3A6NNA2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 MPDU1-223ENST00000582151 728 ntBASIC16.33■□□□□ 0.2
SRRM3A6NNA2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 AC009118.2-201ENST00000613275 655 ntBASIC16.33■□□□□ 0.2
SRRM3A6NNA2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 KRT8P44-201ENST00000441609 1350 ntBASIC16.33■□□□□ 0.2
SRRM3A6NNA2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 AJ011931.1-201ENST00000618749 2492 ntBASIC16.33■□□□□ 0.2
SRRM3A6NNA2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM3A6NNA2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 RBPMS2P1-201ENST00000437762 623 ntBASIC16.32■□□□□ 0.2
SRRM3A6NNA2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 AC097493.3-201ENST00000509725 367 ntBASIC16.32■□□□□ 0.2
SRRM3A6NNA2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 AC011477.6-201ENST00000604980 1927 ntBASIC16.32■□□□□ 0.2
SRRM3A6NNA2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 AC139749.1-202ENST00000617529 3139 ntBASIC16.32■□□□□ 0.2
SRRM3A6NNA2 AC005252.3-201ENST00000623855 2258 ntBASIC16.32■□□□□ 0.2
SRRM3A6NNA2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM3A6NNA2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms