Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AL645939.2-201ENST00000427340 991 ntBASIC13.46□□□□□ -0.25
TMEM235A6NFC5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 AC092910.1-201ENST00000482027 1129 ntBASIC13.46□□□□□ -0.25
TMEM235A6NFC5 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 AC010507.1-201ENST00000633895 436 ntBASIC13.46□□□□□ -0.25
TMEM235A6NFC5 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 ZBED1P1-201ENST00000502364 1930 ntBASIC13.46□□□□□ -0.25
TMEM235A6NFC5 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
TMEM235A6NFC5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM235A6NFC5 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.46□□□□□ -0.26
TMEM235A6NFC5 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM235A6NFC5 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
TMEM235A6NFC5 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM235A6NFC5 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM235A6NFC5 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM235A6NFC5 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
TMEM235A6NFC5 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM235A6NFC5 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TMEM235A6NFC5 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.26
TMEM235A6NFC5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 AF186996.4-201ENST00000467186 377 ntBASIC13.45□□□□□ -0.26
TMEM235A6NFC5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 INTS4P1-203ENST00000641008 3683 ntBASIC13.45□□□□□ -0.26
TMEM235A6NFC5 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TMEM235A6NFC5 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.44□□□□□ -0.26
TMEM235A6NFC5 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM235A6NFC5 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TMEM235A6NFC5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM235A6NFC5 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms