Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC087481.3-201ENST00000602886 1894 ntBASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TCRBV4S1A1TA0A5B7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MIR661-201ENST00000384842 89 ntBASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 RPL37AP1-201ENST00000412502 279 ntBASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SERBP1P5-201ENST00000510079 1181 ntBASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AL079307.3-201ENST00000556114 283 ntBASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TEX28P1-201ENST00000613479 1221 ntBASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TEX28P2-201ENST00000617764 1221 ntBASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AF228730.6-201ENST00000641497 218 ntBASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC084121.3-201ENST00000641716 218 ntBASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC105233.6-201ENST00000642093 218 ntBASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TCRBV4S1A1TA0A5B7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC087499.5-201ENST00000452760 1342 ntBASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms