Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 AL359881.3-201ENST00000602640 1721 ntBASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TCRBV3S1A0A5B6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 AC073648.2-201ENST00000510116 352 ntBASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 MIR4751-201ENST00000578027 74 ntBASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms