Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC196A0A1B0GTZ2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 SRD5A3P1-201ENST00000603021 949 ntBASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC196A0A1B0GTZ2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 AC084364.1-201ENST00000551967 1556 ntBASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 AJ011932.1-201ENST00000621707 465 ntBASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 FLJ16779-201ENST00000612722 7638 ntBASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCDC196A0A1B0GTZ2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC196A0A1B0GTZ2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms