Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 AC008894.3-201ENST00000624324 3103 ntBASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 MIR1202-201ENST00000408529 83 ntBASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 AC004945.1-201ENST00000416738 983 ntBASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 AC007969.1-201ENST00000433675 447 ntBASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 MIR4741-201ENST00000579822 90 ntBASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 AL138709.1-201ENST00000614840 1693 ntBASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 AL008638.5-201ENST00000623814 1298 ntBASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 AC244452.3-201ENST00000636814 210 ntBASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC187A0A096LP49 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 AC006449.6-201ENST00000612330 2296 ntBASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 SLC25A24P2-201ENST00000415059 510 ntBASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 CD8B2-202ENST00000417670 633 ntBASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 MTX1P1-201ENST00000440904 838 ntBASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 AL591846.1-201ENST00000451736 433 ntBASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 EEF1DP1-201ENST00000585891 896 ntBASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.78□□□□□ -0.04
CCDC187A0A096LP49 AC006453.4-201ENST00000636949 1252 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms