Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 AP001063.1-201ENST00000568332 529 ntBASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 PDIA3P1-201ENST00000471856 1510 ntBASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 AL513523.2-202ENST00000427283 2040 ntBASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 AC006449.6-201ENST00000612330 2296 ntBASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CSNK1G3Q9Y6M4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 AC005052.1-201ENST00000625181 2492 ntBASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 ANKRD19P-201ENST00000338192 862 ntBASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 AL355864.2-201ENST00000447420 863 ntBASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 VDAC1P7-201ENST00000462417 847 ntBASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 AC092658.1-201ENST00000505836 891 ntBASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 AL033527.4-201ENST00000641026 673 ntBASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 AL607033.1-201ENST00000623900 1599 ntBASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CSNK1G3Q9Y6M4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 BAATP1-201ENST00000412284 1225 ntBASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms