Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 BX640514.1-201ENST00000583223 1918 ntBASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGB1Q9Y5G3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.46□□□□□ -0.1
PCDHGB1Q9Y5G3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGB1Q9Y5G3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHGB1Q9Y5G3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 RPL13AP23-201ENST00000480739 586 ntBASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 AC073648.2-201ENST00000510116 352 ntBASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 AC021087.4-201ENST00000563761 564 ntBASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 AL645728.2-201ENST00000641974 660 ntBASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHGB1Q9Y5G3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 SBF1P1-201ENST00000444527 5631 ntBASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 AC073621.1-201ENST00000392730 636 ntBASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 AC010327.5-201ENST00000586923 3061 ntBASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 AL359183.1-201ENST00000623796 2132 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms