Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
COPS3Q9UNS2 LINC00528-201ENST00000600723 2160 ntBASIC14.07□□□□□ -0.16
COPS3Q9UNS2 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
COPS3Q9UNS2 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.07□□□□□ -0.16
COPS3Q9UNS2 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
COPS3Q9UNS2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COPS3Q9UNS2 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.07□□□□□ -0.16
COPS3Q9UNS2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.07□□□□□ -0.16
COPS3Q9UNS2 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
COPS3Q9UNS2 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
COPS3Q9UNS2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COPS3Q9UNS2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.07□□□□□ -0.16
COPS3Q9UNS2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COPS3Q9UNS2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
COPS3Q9UNS2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.07□□□□□ -0.16
COPS3Q9UNS2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 AC126365.1-201ENST00000578585 1514 ntBASIC14.06□□□□□ -0.16
COPS3Q9UNS2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 AC004987.2-201ENST00000395959 1148 ntBASIC14.06□□□□□ -0.16
COPS3Q9UNS2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 RPL13AP23-201ENST00000480739 586 ntBASIC14.06□□□□□ -0.16
COPS3Q9UNS2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 RNA5SP410-201ENST00000516285 106 ntBASIC14.06□□□□□ -0.16
COPS3Q9UNS2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 KRT126P-201ENST00000549467 1181 ntBASIC14.06□□□□□ -0.16
COPS3Q9UNS2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 AL135744.1-201ENST00000565098 629 ntBASIC14.06□□□□□ -0.16
COPS3Q9UNS2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
COPS3Q9UNS2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 AL355306.1-201ENST00000415580 579 ntBASIC14.05□□□□□ -0.16
COPS3Q9UNS2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 AC008267.7-201ENST00000624570 1194 ntBASIC14.05□□□□□ -0.16
COPS3Q9UNS2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms