Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 GPR53P-205ENST00000457298 1084 ntBASIC15.69■□□□□ 0.1
SPASTQ9UBP0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 REXO1L8P-201ENST00000604378 1897 ntBASIC15.69■□□□□ 0.1
SPASTQ9UBP0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 MST1L-201ENST00000442552 2185 ntBASIC15.69■□□□□ 0.1
SPASTQ9UBP0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SPASTQ9UBP0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 AC104596.2-201ENST00000512793 793 ntBASIC15.68■□□□□ 0.1
SPASTQ9UBP0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 KRT8P37-201ENST00000451609 1420 ntBASIC15.68■□□□□ 0.1
SPASTQ9UBP0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPASTQ9UBP0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 U91328.1-201ENST00000437528 223 ntBASIC15.67■□□□□ 0.1
SPASTQ9UBP0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 RARRES2P5-201ENST00000564013 466 ntBASIC15.67■□□□□ 0.1
SPASTQ9UBP0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 IGHV3-72-202ENST00000621503 303 ntBASIC15.67■□□□□ 0.1
SPASTQ9UBP0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.67■□□□□ 0.1
SPASTQ9UBP0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms