Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 C1QBPP1-201ENST00000400117 770 ntBASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 ATP5G2P4-201ENST00000442175 420 ntBASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 IGHV3-71-201ENST00000523324 359 ntBASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 ENPP7P5-201ENST00000541031 1031 ntBASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 PCDHB19P-201ENST00000570871 2371 ntBASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
CLCF1Q9UBD9 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 AC046158.3-201ENST00000624947 2558 ntBASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 ACA64.2-201ENST00000459014 129 ntBASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 USP32P1-208ENST00000506594 1164 ntBASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 KRT17P8-201ENST00000540749 863 ntBASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 HILS1-202ENST00000545329 423 ntBASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 MIR5189-201ENST00000577370 114 ntBASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.92□□□□□ -0.18
CLCF1Q9UBD9 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms