Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 AC012441.1-201ENST00000446669 685 ntBASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 AC007551.1-201ENST00000457394 519 ntBASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 AC093525.8-201ENST00000624099 1342 ntBASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 FER1L4-210ENST00000615531 5998 ntBASIC15.13■□□□□ 0.01
LRIT1Q9P2V4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 MSTO2P-201ENST00000314835 1709 ntBASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 AL391005.1-201ENST00000623953 2435 ntBASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 REXO1L6P-201ENST00000603433 1515 ntBASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRIT1Q9P2V4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 AC092933.1-201ENST00000393644 945 ntBASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LRIT1Q9P2V4 RPL7P3-201ENST00000441388 714 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms