Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 TTTY23B-201ENST00000442790 549 ntBASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 VDAC1P7-201ENST00000462417 847 ntBASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HMG20BQ9P0W2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 AL133267.1-201ENST00000398220 340 ntBASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 AC079776.1-201ENST00000401540 1152 ntBASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 AC015910.1-201ENST00000579400 975 ntBASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 AC133539.2-201ENST00000604757 467 ntBASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 ABBA01031660.1-201ENST00000635219 756 ntBASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 AC020658.6-201ENST00000623564 1870 ntBASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.02■□□□□ 0.64
HMG20BQ9P0W2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HMG20BQ9P0W2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HMG20BQ9P0W2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 INTS4P2-202ENST00000614726 2019 ntBASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 OR8S1-201ENST00000310194 1080 ntBASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 AC010319.3-201ENST00000597028 470 ntBASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HMG20BQ9P0W2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19■□□□□ 0.63
HMG20BQ9P0W2 KRT8P22-201ENST00000562317 1415 ntBASIC19■□□□□ 0.63
HMG20BQ9P0W2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms