Protein–RNA interactions for Protein: Q9NYL5

CYP39A1, 24-hydroxycholesterol 7-alpha-hydroxylase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP39A1Q9NYL5 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 AC079316.1-201ENST00000548397 411 ntBASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 AC025181.2-201ENST00000606994 802 ntBASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 MST1L-201ENST00000442552 2185 ntBASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CYP39A1Q9NYL5 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 CYP2T1P-202ENST00000641596 2535 ntBASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 AC024909.3-201ENST00000611513 2257 ntBASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 MIR4525-201ENST00000580000 75 ntBASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 BX539320.1-201ENST00000623759 877 ntBASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.68■□□□□ 0.42
CYP39A1Q9NYL5 OR6D1P-203ENST00000641209 4860 ntBASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 KRT18P25-201ENST00000508931 1278 ntBASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 AC145423.3-201ENST00000615987 467 ntBASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CYP39A1Q9NYL5 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.66■□□□□ 0.42
CYP39A1Q9NYL5 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.66■□□□□ 0.42
CYP39A1Q9NYL5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CYP39A1Q9NYL5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CYP39A1Q9NYL5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.66■□□□□ 0.42
CYP39A1Q9NYL5 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CYP39A1Q9NYL5 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.66■□□□□ 0.42
CYP39A1Q9NYL5 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CYP39A1Q9NYL5 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CYP39A1Q9NYL5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms