Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 KRT8P23-201ENST00000560090 1207 ntBASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 AC008267.7-201ENST00000624570 1194 ntBASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 AC105339.1-204ENST00000636249 355 ntBASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LIN7CQ9NUP9 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 C18orf15-201ENST00000623680 2534 ntBASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 TCAF2P1-201ENST00000291129 2421 ntBASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 AC079140.1-201ENST00000508039 487 ntBASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 IGHV3-62-201ENST00000520057 340 ntBASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 AL513210.1-201ENST00000629608 234 ntBASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 AC134684.3-201ENST00000641758 218 ntBASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LIN7CQ9NUP9 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.1□□□□□ -0.31
LIN7CQ9NUP9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms