Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 RNA5SP421-201ENST00000516864 134 ntBASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 AC023310.3-201ENST00000557027 670 ntBASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 AC100756.1-201ENST00000562736 682 ntBASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 AC138749.3-201ENST00000567691 622 ntBASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 AC116165.1-201ENST00000611806 668 ntBASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
BLOC1S4Q9NUP1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 INGX-202ENST00000489074 768 ntBASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BLOC1S4Q9NUP1 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 BCRP1-201ENST00000444246 691 ntBASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 SPTLC1P1-201ENST00000447199 261 ntBASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 DOC2GP-202ENST00000514950 1163 ntBASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.37■□□□□ 0.37
BLOC1S4Q9NUP1 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 SPDYE19P-201ENST00000338590 713 ntBASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.36■□□□□ 0.37
BLOC1S4Q9NUP1 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms