Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 AC073439.1-201ENST00000624121 1774 ntBASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 PRYP6-201ENST00000514804 343 ntBASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 RNA5SP419-201ENST00000515908 135 ntBASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 RNA5SP415-201ENST00000517246 115 ntBASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 AC010507.1-201ENST00000633895 436 ntBASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 AC020658.6-201ENST00000623564 1870 ntBASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.76□□□□□ -0.21
PCDHB16Q9NRJ7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 AC002056.1-201ENST00000395613 760 ntBASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 IGLL3P-201ENST00000412472 434 ntBASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms