Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
KIAA1549Q9HCM3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 C18orf15-201ENST00000623680 2534 ntBASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KIAA1549Q9HCM3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
KIAA1549Q9HCM3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
KIAA1549Q9HCM3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
KIAA1549Q9HCM3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
KIAA1549Q9HCM3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
KIAA1549Q9HCM3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.19
KIAA1549Q9HCM3 AL355864.2-201ENST00000447420 863 ntBASIC13.83□□□□□ -0.19
KIAA1549Q9HCM3 AC004066.1-201ENST00000502488 802 ntBASIC13.83□□□□□ -0.19
KIAA1549Q9HCM3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.83□□□□□ -0.19
KIAA1549Q9HCM3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
KIAA1549Q9HCM3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.83□□□□□ -0.19
KIAA1549Q9HCM3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
KIAA1549Q9HCM3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.83□□□□□ -0.19
KIAA1549Q9HCM3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.83□□□□□ -0.19
KIAA1549Q9HCM3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.83□□□□□ -0.19
KIAA1549Q9HCM3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
KIAA1549Q9HCM3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 AL109954.1-202ENST00000564051 2148 ntBASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 AC008741.2-201ENST00000612792 3115 ntBASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 BAATP1-201ENST00000412284 1225 ntBASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 RPL7P3-201ENST00000441388 714 ntBASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 AL022328.1-201ENST00000610050 478 ntBASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.83□□□□□ -0.2
KIAA1549Q9HCM3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms