Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 RNA5SP415-201ENST00000517246 115 ntBASIC17.55■□□□□ 0.4
CBX8Q9HC52 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CBX8Q9HC52 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CBX8Q9HC52 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX8Q9HC52 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CBX8Q9HC52 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX8Q9HC52 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX8Q9HC52 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CBX8Q9HC52 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX8Q9HC52 AC068587.6-202ENST00000641839 5619 ntBASIC17.54■□□□□ 0.4
CBX8Q9HC52 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CBX8Q9HC52 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX8Q9HC52 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CBX8Q9HC52 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX8Q9HC52 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CBX8Q9HC52 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX8Q9HC52 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX8Q9HC52 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX8Q9HC52 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX8Q9HC52 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX8Q9HC52 AC105233.2-201ENST00000523697 349 ntBASIC17.54■□□□□ 0.4
CBX8Q9HC52 AF228730.5-201ENST00000530288 346 ntBASIC17.54■□□□□ 0.4
CBX8Q9HC52 KRT19P2-202ENST00000557173 1012 ntBASIC17.54■□□□□ 0.4
CBX8Q9HC52 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX8Q9HC52 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.54■□□□□ 0.4
CBX8Q9HC52 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CBX8Q9HC52 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CBX8Q9HC52 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX8Q9HC52 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CBX8Q9HC52 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CBX8Q9HC52 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX8Q9HC52 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX8Q9HC52 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX8Q9HC52 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX8Q9HC52 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX8Q9HC52 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX8Q9HC52 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CBX8Q9HC52 AL607033.1-201ENST00000623900 1599 ntBASIC17.53■□□□□ 0.4
CBX8Q9HC52 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CBX8Q9HC52 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.53■□□□□ 0.4
CBX8Q9HC52 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.53■□□□□ 0.4
CBX8Q9HC52 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.53■□□□□ 0.4
CBX8Q9HC52 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.53■□□□□ 0.4
CBX8Q9HC52 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.53■□□□□ 0.4
CBX8Q9HC52 AC018845.2-201ENST00000568326 409 ntBASIC17.53■□□□□ 0.4
CBX8Q9HC52 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 AC006504.5-208ENST00000588784 2401 ntBASIC17.53■□□□□ 0.4
CBX8Q9HC52 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.53■□□□□ 0.4
CBX8Q9HC52 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 AC097359.2-201ENST00000604992 2389 ntBASIC17.53■□□□□ 0.4
CBX8Q9HC52 MTHFR-210ENST00000641407 2387 ntBASIC17.53■□□□□ 0.4
CBX8Q9HC52 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX8Q9HC52 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms