Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 AC096734.2-201ENST00000562054 433 ntBASIC19.35■□□□□ 0.69
UPF2Q9HAU5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
UPF2Q9HAU5 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 IGLL3P-201ENST00000412472 434 ntBASIC19.34■□□□□ 0.69
UPF2Q9HAU5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 AC023141.13-201ENST00000604991 943 ntBASIC19.34■□□□□ 0.69
UPF2Q9HAU5 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UPF2Q9HAU5 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
UPF2Q9HAU5 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UPF2Q9HAU5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
UPF2Q9HAU5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.33■□□□□ 0.69
UPF2Q9HAU5 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UPF2Q9HAU5 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
UPF2Q9HAU5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.33■□□□□ 0.69
UPF2Q9HAU5 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC19.33■□□□□ 0.69
UPF2Q9HAU5 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
UPF2Q9HAU5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
UPF2Q9HAU5 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.33■□□□□ 0.69
UPF2Q9HAU5 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UPF2Q9HAU5 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC19.33■□□□□ 0.69
UPF2Q9HAU5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.33■□□□□ 0.68
UPF2Q9HAU5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.33■□□□□ 0.68
UPF2Q9HAU5 AL445228.2-201ENST00000605589 952 ntBASIC19.33■□□□□ 0.68
UPF2Q9HAU5 AL161645.1-201ENST00000622716 1255 ntBASIC19.33■□□□□ 0.68
UPF2Q9HAU5 AC010507.1-201ENST00000633895 436 ntBASIC19.33■□□□□ 0.68
UPF2Q9HAU5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
UPF2Q9HAU5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.33■□□□□ 0.68
UPF2Q9HAU5 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPF2Q9HAU5 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPF2Q9HAU5 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPF2Q9HAU5 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
UPF2Q9HAU5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UPF2Q9HAU5 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPF2Q9HAU5 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPF2Q9HAU5 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UPF2Q9HAU5 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.33■□□□□ 0.68
UPF2Q9HAU5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC19.33■□□□□ 0.68
UPF2Q9HAU5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms