Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PIF1Q9H611 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.09■□□□□ 0.01
PIF1Q9H611 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PIF1Q9H611 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.09■□□□□ 0.01
PIF1Q9H611 LINC00552-201ENST00000625151 2579 ntBASIC15.09■□□□□ 0.01
PIF1Q9H611 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.09■□□□□ 0.01
PIF1Q9H611 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PIF1Q9H611 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PIF1Q9H611 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PIF1Q9H611 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.09■□□□□ 0.01
PIF1Q9H611 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.09■□□□□ 0.01
PIF1Q9H611 AL590627.1-203ENST00000421194 1026 ntBASIC15.09■□□□□ 0.01
PIF1Q9H611 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 PRYP6-201ENST00000514804 343 ntBASIC15.09■□□□□ 0.01
PIF1Q9H611 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.09■□□□□ 0.01
PIF1Q9H611 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.09■□□□□ 0.01
PIF1Q9H611 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.09■□□□□ 0.01
PIF1Q9H611 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.09■□□□□ 0.01
PIF1Q9H611 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PIF1Q9H611 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.09■□□□□ 0.01
PIF1Q9H611 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PIF1Q9H611 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.09■□□□□ 0.01
PIF1Q9H611 ZNF259P1-201ENST00000407656 1365 ntBASIC15.09■□□□□ 0.01
PIF1Q9H611 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.09■□□□□ 0.01
PIF1Q9H611 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PIF1Q9H611 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.09■□□□□ 0.01
PIF1Q9H611 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PIF1Q9H611 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PIF1Q9H611 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
PIF1Q9H611 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PIF1Q9H611 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.08■□□□□ 0.01
PIF1Q9H611 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
PIF1Q9H611 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PIF1Q9H611 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
PIF1Q9H611 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.08■□□□□ 0
PIF1Q9H611 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.08■□□□□ 0
PIF1Q9H611 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
PIF1Q9H611 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PIF1Q9H611 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.08■□□□□ 0
PIF1Q9H611 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.08■□□□□ 0
PIF1Q9H611 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PIF1Q9H611 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PIF1Q9H611 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PIF1Q9H611 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.08■□□□□ 0
PIF1Q9H611 HCG4B-203ENST00000450128 991 ntBASIC15.08■□□□□ 0
PIF1Q9H611 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.08■□□□□ 0
PIF1Q9H611 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.08■□□□□ 0
PIF1Q9H611 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.08■□□□□ 0
PIF1Q9H611 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.08■□□□□ 0
PIF1Q9H611 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.08■□□□□ 0
PIF1Q9H611 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.08■□□□□ 0
PIF1Q9H611 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PIF1Q9H611 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.08■□□□□ 0
PIF1Q9H611 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.08■□□□□ 0
PIF1Q9H611 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.08■□□□□ 0
PIF1Q9H611 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PIF1Q9H611 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.08■□□□□ 0
PIF1Q9H611 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.08■□□□□ 0
PIF1Q9H611 AC127383.1-201ENST00000444697 1800 ntBASIC15.08■□□□□ 0
PIF1Q9H611 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PIF1Q9H611 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PIF1Q9H611 AC015656.1-201ENST00000624209 3578 ntBASIC15.08■□□□□ 0
PIF1Q9H611 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PIF1Q9H611 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PIF1Q9H611 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PIF1Q9H611 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PIF1Q9H611 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PIF1Q9H611 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PIF1Q9H611 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.07■□□□□ 0
PIF1Q9H611 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
PIF1Q9H611 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
PIF1Q9H611 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.07■□□□□ 0
PIF1Q9H611 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PIF1Q9H611 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.07■□□□□ 0
PIF1Q9H611 AL591424.1-201ENST00000442569 1213 ntBASIC15.07■□□□□ 0
PIF1Q9H611 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.07■□□□□ 0
PIF1Q9H611 RPL13AP23-201ENST00000480739 586 ntBASIC15.07■□□□□ 0
PIF1Q9H611 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.07■□□□□ 0
PIF1Q9H611 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.07■□□□□ 0
PIF1Q9H611 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.07■□□□□ 0
PIF1Q9H611 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.07■□□□□ 0
PIF1Q9H611 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.07■□□□□ 0
PIF1Q9H611 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms