Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NXF3Q9H4D5 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.85■□□□□ 0.29
NXF3Q9H4D5 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NXF3Q9H4D5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NXF3Q9H4D5 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NXF3Q9H4D5 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NXF3Q9H4D5 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NXF3Q9H4D5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
NXF3Q9H4D5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NXF3Q9H4D5 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NXF3Q9H4D5 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.85■□□□□ 0.29
NXF3Q9H4D5 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NXF3Q9H4D5 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NXF3Q9H4D5 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NXF3Q9H4D5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NXF3Q9H4D5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NXF3Q9H4D5 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.85■□□□□ 0.29
NXF3Q9H4D5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 AC092933.1-201ENST00000393644 945 ntBASIC16.84■□□□□ 0.29
NXF3Q9H4D5 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 AP005482.1-201ENST00000563722 1273 ntBASIC16.84■□□□□ 0.29
NXF3Q9H4D5 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 AC133552.6-201ENST00000613406 534 ntBASIC16.84■□□□□ 0.29
NXF3Q9H4D5 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 AL138799.1-201ENST00000448213 1675 ntBASIC16.84■□□□□ 0.29
NXF3Q9H4D5 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NXF3Q9H4D5 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NXF3Q9H4D5 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.83■□□□□ 0.29
NXF3Q9H4D5 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NXF3Q9H4D5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NXF3Q9H4D5 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 AC022137.2-201ENST00000503482 481 ntBASIC16.83■□□□□ 0.28
NXF3Q9H4D5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.83■□□□□ 0.28
NXF3Q9H4D5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
NXF3Q9H4D5 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NXF3Q9H4D5 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms