Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 AC233702.3-201ENST00000578656 1387 ntBASIC13.82□□□□□ -0.2
SLIRPQ9GZT3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SLIRPQ9GZT3 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SLIRPQ9GZT3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.82□□□□□ -0.2
SLIRPQ9GZT3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLIRPQ9GZT3 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.82□□□□□ -0.2
SLIRPQ9GZT3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 NSUN5P2-203ENST00000457352 1529 ntBASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 AC015818.8-201ENST00000587907 1519 ntBASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 AL589702.1-201ENST00000641229 1509 ntBASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 RNU1-129P-201ENST00000384064 167 ntBASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 U1.21-201ENST00000580816 167 ntBASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 AC083964.2-201ENST00000623988 2396 ntBASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 AP000845.1-201ENST00000581677 2131 ntBASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.81□□□□□ -0.2
SLIRPQ9GZT3 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 AL365209.1-201ENST00000624418 6473 ntBASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 NTF6B-201ENST00000591913 560 ntBASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms