Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 DEF8-202ENST00000418391 852 ntTSL 2 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 SERPINA13P-202ENST00000478994 924 ntBASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 COX5BP1-201ENST00000507622 393 ntBASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 AC044849.1-201ENST00000519737 1188 ntBASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 NCK2-206ENST00000522586 490 ntTSL 5 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 AC097724.1-201ENST00000609581 426 ntBASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 AC007663.3-201ENST00000609632 465 ntBASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 AC007787.1-201ENST00000588095 1583 ntBASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTFDC1Q9BY42 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 CYP46A4P-201ENST00000414953 267 ntBASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 POM121L8P-201ENST00000417732 1281 ntBASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 POM121L9P-203ENST00000441984 1285 ntBASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 AP003171.2-201ENST00000528208 925 ntBASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 RN7SL713P-201ENST00000582127 302 ntBASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 AC073413.1-201ENST00000603927 732 ntBASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 AC138649.2-201ENST00000615886 705 ntBASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 AC091812.3-201ENST00000621362 345 ntBASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 LRRC59-203ENST00000576448 1531 ntBASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.79■□□□□ 0.6
RTFDC1Q9BY42 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 AC006449.5-201ENST00000610658 2098 ntBASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 FXNP2-201ENST00000411625 547 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms