Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 AL162726.2-201ENST00000438986 1017 ntBASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 TARDBPP1-201ENST00000442013 1203 ntBASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 MIR4313-201ENST00000580760 101 ntBASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 MIR4259-201ENST00000584466 101 ntBASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 MIR6799-201ENST00000620297 69 ntBASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 AC009090.5-201ENST00000624886 2285 ntBASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 RN7SL399P-201ENST00000471648 279 ntBASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 TNRC18P2-201ENST00000417666 2714 ntBASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 AC105250.1-201ENST00000509378 2057 ntBASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPAP1Q9BWH6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.62
RPAP1Q9BWH6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 MIR5189-201ENST00000577370 114 ntBASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 BRI3BPP1-201ENST00000594224 787 ntBASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 AC233724.13-201ENST00000598383 410 ntBASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 AC133552.6-201ENST00000613406 534 ntBASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RPAP1Q9BWH6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms