Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 AC136759.1-202ENST00000530858 2194 ntBASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 RNA5SP415-201ENST00000517246 115 ntBASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 AL671883.3-201ENST00000603274 991 ntBASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 AC006538.3-201ENST00000612495 578 ntBASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 FAM197Y3-203ENST00000618346 717 ntBASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 AL589182.2-201ENST00000619332 1049 ntBASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.26□□□□□ -0.45
NDUFAF3Q9BU61 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 BX842568.4-201ENST00000421222 227 ntBASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 RNA5SP416-201ENST00000516838 111 ntBASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.25□□□□□ -0.45
NDUFAF3Q9BU61 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms