Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC11.98□□□□□ -0.49
VGLL1Q99990 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11.98□□□□□ -0.49
VGLL1Q99990 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.98□□□□□ -0.49
VGLL1Q99990 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC11.98□□□□□ -0.49
VGLL1Q99990 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC11.98□□□□□ -0.49
VGLL1Q99990 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC11.98□□□□□ -0.49
VGLL1Q99990 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC11.98□□□□□ -0.49
VGLL1Q99990 MIR4313-201ENST00000580760 101 ntBASIC11.98□□□□□ -0.49
VGLL1Q99990 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC11.98□□□□□ -0.49
VGLL1Q99990 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
VGLL1Q99990 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VGLL1Q99990 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.98□□□□□ -0.49
VGLL1Q99990 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
VGLL1Q99990 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VGLL1Q99990 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
VGLL1Q99990 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
VGLL1Q99990 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
VGLL1Q99990 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
VGLL1Q99990 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VGLL1Q99990 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
VGLL1Q99990 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VGLL1Q99990 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC11.98□□□□□ -0.49
VGLL1Q99990 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VGLL1Q99990 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
VGLL1Q99990 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
VGLL1Q99990 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VGLL1Q99990 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC11.98□□□□□ -0.49
VGLL1Q99990 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC11.98□□□□□ -0.49
VGLL1Q99990 REXO1L1P-202ENST00000608646 1974 ntBASIC11.98□□□□□ -0.49
VGLL1Q99990 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VGLL1Q99990 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.98□□□□□ -0.49
VGLL1Q99990 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
VGLL1Q99990 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
VGLL1Q99990 AC127383.1-201ENST00000444697 1800 ntBASIC11.97□□□□□ -0.49
VGLL1Q99990 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
VGLL1Q99990 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
VGLL1Q99990 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
VGLL1Q99990 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
VGLL1Q99990 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11.97□□□□□ -0.49
VGLL1Q99990 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.97□□□□□ -0.49
VGLL1Q99990 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
VGLL1Q99990 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.97□□□□□ -0.49
VGLL1Q99990 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
VGLL1Q99990 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.97□□□□□ -0.49
VGLL1Q99990 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.97□□□□□ -0.49
VGLL1Q99990 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.97□□□□□ -0.49
VGLL1Q99990 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
VGLL1Q99990 KRT18P2-201ENST00000447938 1258 ntBASIC11.97□□□□□ -0.49
VGLL1Q99990 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
VGLL1Q99990 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
VGLL1Q99990 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.97□□□□□ -0.49
VGLL1Q99990 AC098859.1-201ENST00000502915 1238 ntBASIC11.97□□□□□ -0.49
VGLL1Q99990 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.97□□□□□ -0.49
VGLL1Q99990 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.97□□□□□ -0.49
VGLL1Q99990 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC11.97□□□□□ -0.49
VGLL1Q99990 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.97□□□□□ -0.49
VGLL1Q99990 AC068137.2-201ENST00000605408 478 ntBASIC11.97□□□□□ -0.49
VGLL1Q99990 AC064836.3-201ENST00000607928 673 ntBASIC11.97□□□□□ -0.49
VGLL1Q99990 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC11.97□□□□□ -0.49
VGLL1Q99990 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC11.97□□□□□ -0.49
VGLL1Q99990 ZEB1-AS1-208ENST00000607166 2503 ntBASIC11.97□□□□□ -0.49
VGLL1Q99990 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
VGLL1Q99990 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.97□□□□□ -0.49
VGLL1Q99990 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VGLL1Q99990 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VGLL1Q99990 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VGLL1Q99990 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VGLL1Q99990 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VGLL1Q99990 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VGLL1Q99990 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VGLL1Q99990 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
VGLL1Q99990 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.96□□□□□ -0.49
VGLL1Q99990 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC11.96□□□□□ -0.49
VGLL1Q99990 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.96□□□□□ -0.49
VGLL1Q99990 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms