Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LITAFQ99732 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LITAFQ99732 AC023090.2-201ENST00000625182 2110 ntBASIC10.46□□□□□ -0.74
LITAFQ99732 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LITAFQ99732 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LITAFQ99732 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
LITAFQ99732 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC10.46□□□□□ -0.74
LITAFQ99732 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LITAFQ99732 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LITAFQ99732 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC10.46□□□□□ -0.74
LITAFQ99732 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
LITAFQ99732 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
LITAFQ99732 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC10.45□□□□□ -0.74
LITAFQ99732 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC10.45□□□□□ -0.74
LITAFQ99732 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
LITAFQ99732 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
LITAFQ99732 AP000845.1-201ENST00000581677 2131 ntBASIC10.45□□□□□ -0.74
LITAFQ99732 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC10.45□□□□□ -0.74
LITAFQ99732 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC10.45□□□□□ -0.74
LITAFQ99732 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
LITAFQ99732 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
LITAFQ99732 KRT18P1-202ENST00000452408 1331 ntBASIC10.45□□□□□ -0.74
LITAFQ99732 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
LITAFQ99732 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
LITAFQ99732 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC10.45□□□□□ -0.74
LITAFQ99732 TOB2P1-201ENST00000469761 992 ntBASIC10.45□□□□□ -0.74
LITAFQ99732 AL136038.3-201ENST00000561909 1096 ntBASIC10.45□□□□□ -0.74
LITAFQ99732 QPRT-203ENST00000562473 579 ntTSL 3 BASIC10.45□□□□□ -0.74
LITAFQ99732 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC10.45□□□□□ -0.74
LITAFQ99732 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC10.45□□□□□ -0.74
LITAFQ99732 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
LITAFQ99732 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
LITAFQ99732 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
LITAFQ99732 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC10.45□□□□□ -0.74
LITAFQ99732 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC10.45□□□□□ -0.74
LITAFQ99732 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 AC126755.1-201ENST00000525846 6405 ntBASIC10.45□□□□□ -0.74
LITAFQ99732 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC10.45□□□□□ -0.74
LITAFQ99732 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LITAFQ99732 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
LITAFQ99732 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC10.44□□□□□ -0.74
LITAFQ99732 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC10.44□□□□□ -0.74
LITAFQ99732 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC10.44□□□□□ -0.74
LITAFQ99732 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 AL691432.1-201ENST00000596308 1422 ntBASIC10.44□□□□□ -0.74
LITAFQ99732 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC10.44□□□□□ -0.74
LITAFQ99732 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
LITAFQ99732 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC10.44□□□□□ -0.74
LITAFQ99732 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC10.44□□□□□ -0.74
LITAFQ99732 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
LITAFQ99732 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LITAFQ99732 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC10.44□□□□□ -0.74
LITAFQ99732 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
LITAFQ99732 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC10.44□□□□□ -0.74
LITAFQ99732 AC106795.1-205ENST00000512851 1056 ntBASIC10.44□□□□□ -0.74
LITAFQ99732 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms