Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 AC134407.2-201ENST00000625089 1978 ntBASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 AC004987.2-201ENST00000395959 1148 ntBASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 MARK2P5-201ENST00000507649 634 ntBASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 RTN3P1-201ENST00000536295 711 ntBASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 HKR1-225ENST00000592168 566 ntTSL 4 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 MME-218ENST00000625667 363 ntTSL 5 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 AC012158.2-201ENST00000536546 354 ntBASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 PIN4P1-201ENST00000451079 396 ntBASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 AC107373.2-201ENST00000607735 490 ntBASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 FO393412.1-201ENST00000619841 382 ntBASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 AC051619.9-201ENST00000623237 597 ntBASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CSMD1Q96PZ7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 RNF146-211ENST00000609447 607 ntTSL 4 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 DNM1P51-201ENST00000558149 522 ntBASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 AC011742.3-201ENST00000439053 820 ntBASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 GAPDHP40-201ENST00000505218 1006 ntBASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 BNIP3P1-202ENST00000550043 1585 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms