Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 AL591684.3-201ENST00000605187 298 ntBASIC11.97□□□□□ -0.49
AP1S3Q96PC3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 AR-203ENST00000396044 10221 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 CICP20-201ENST00000443330 2801 ntBASIC11.96□□□□□ -0.49
AP1S3Q96PC3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 AL031133.1-201ENST00000406807 723 ntBASIC11.96□□□□□ -0.49
AP1S3Q96PC3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 AC026396.1-201ENST00000419388 421 ntBASIC11.96□□□□□ -0.49
AP1S3Q96PC3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 MIR5100-201ENST00000579544 119 ntBASIC11.96□□□□□ -0.49
AP1S3Q96PC3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 DBP-204ENST00000599385 709 ntTSL 3 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.96□□□□□ -0.49
AP1S3Q96PC3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
AP1S3Q96PC3 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
AP1S3Q96PC3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
AP1S3Q96PC3 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
AP1S3Q96PC3 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
AP1S3Q96PC3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC11.96□□□□□ -0.5
AP1S3Q96PC3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC11.96□□□□□ -0.5
AP1S3Q96PC3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
AP1S3Q96PC3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
AP1S3Q96PC3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
AP1S3Q96PC3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC11.96□□□□□ -0.5
AP1S3Q96PC3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.5
AP1S3Q96PC3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
AP1S3Q96PC3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms