Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 KRT8P44-201ENST00000441609 1350 ntBASIC15.18■□□□□ 0.02
LINC00615Q96LM1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 AL138799.1-201ENST00000448213 1675 ntBASIC15.18■□□□□ 0.02
LINC00615Q96LM1 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.18■□□□□ 0.02
LINC00615Q96LM1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 COX5BP8-201ENST00000416911 349 ntBASIC15.17■□□□□ 0.02
LINC00615Q96LM1 NME2P1-201ENST00000426182 414 ntBASIC15.17■□□□□ 0.02
LINC00615Q96LM1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 AC011495.1-201ENST00000498085 584 ntBASIC15.17■□□□□ 0.02
LINC00615Q96LM1 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 CR383656.12-201ENST00000549567 513 ntBASIC15.17■□□□□ 0.02
LINC00615Q96LM1 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 AC005225.4-201ENST00000557330 545 ntBASIC15.17■□□□□ 0.02
LINC00615Q96LM1 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC00615Q96LM1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00615Q96LM1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.16■□□□□ 0.02
LINC00615Q96LM1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00615Q96LM1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00615Q96LM1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00615Q96LM1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00615Q96LM1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00615Q96LM1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00615Q96LM1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00615Q96LM1 C18orf15-201ENST00000623680 2534 ntBASIC15.16■□□□□ 0.02
LINC00615Q96LM1 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC00615Q96LM1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00615Q96LM1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LINC00615Q96LM1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00615Q96LM1 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00615Q96LM1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC00615Q96LM1 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC00615Q96LM1 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms