Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 FAM86GP-201ENST00000448322 971 ntBASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 AC139530.3-201ENST00000620344 690 ntBASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 AC093028.1-201ENST00000622998 982 ntBASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 AL590560.3-201ENST00000623350 461 ntBASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 TNRC18P2-201ENST00000417666 2714 ntBASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDLIM5Q96HC4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 GHSR-202ENST00000427970 912 ntBASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 KRT18P43-201ENST00000469825 1281 ntBASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 WASH3P-207ENST00000560956 1394 ntBASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 AGAP7P-201ENST00000582299 2062 ntBASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 AC100757.3-201ENST00000622361 1406 ntBASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 AGAP14-201ENST00000624701 2060 ntBASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 AL109936.8-201ENST00000641772 604 ntBASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM5Q96HC4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms