Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 FER1L4-210ENST00000615531 5998 ntBASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 AC134915.1-201ENST00000426461 574 ntBASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 ACTG1P3-201ENST00000431775 1114 ntBASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 RPL13AP25-201ENST00000484130 612 ntBASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 AC015910.1-201ENST00000579400 975 ntBASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0A1Q93050 AP003680.1-201ENST00000598970 3660 ntBASIC17.52■□□□□ 0.39
ATP6V0A1Q93050 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
ATP6V0A1Q93050 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP6V0A1Q93050 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.52■□□□□ 0.39
ATP6V0A1Q93050 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
ATP6V0A1Q93050 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
ATP6V0A1Q93050 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 ANKRD19P-201ENST00000338192 862 ntBASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 MIR5189-201ENST00000577370 114 ntBASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP6V0A1Q93050 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 AL033527.4-201ENST00000641026 673 ntBASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 INTS4P2-202ENST00000614726 2019 ntBASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0A1Q93050 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms