Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.46■□□□□ 0.23
USP13Q92995 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP13Q92995 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP13Q92995 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP13Q92995 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP13Q92995 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP13Q92995 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
USP13Q92995 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
USP13Q92995 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.46■□□□□ 0.23
USP13Q92995 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP13Q92995 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.46■□□□□ 0.23
USP13Q92995 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
USP13Q92995 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
USP13Q92995 KRT18P64-201ENST00000434946 1219 ntBASIC16.46■□□□□ 0.23
USP13Q92995 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP13Q92995 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.46■□□□□ 0.23
USP13Q92995 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
USP13Q92995 AC008735.3-201ENST00000596646 500 ntBASIC16.46■□□□□ 0.23
USP13Q92995 AL512343.1-201ENST00000605837 169 ntBASIC16.46■□□□□ 0.23
USP13Q92995 MIR6805-201ENST00000615055 62 ntBASIC16.46■□□□□ 0.23
USP13Q92995 RPSAP52-203ENST00000622976 1023 ntBASIC16.46■□□□□ 0.23
USP13Q92995 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP13Q92995 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.46■□□□□ 0.23
USP13Q92995 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.46■□□□□ 0.23
USP13Q92995 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.46■□□□□ 0.23
USP13Q92995 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.46■□□□□ 0.23
USP13Q92995 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP13Q92995 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.46■□□□□ 0.23
USP13Q92995 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP13Q92995 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
USP13Q92995 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
USP13Q92995 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP13Q92995 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
USP13Q92995 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.46■□□□□ 0.23
USP13Q92995 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
USP13Q92995 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
USP13Q92995 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.45■□□□□ 0.22
USP13Q92995 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
USP13Q92995 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.45■□□□□ 0.22
USP13Q92995 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
USP13Q92995 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.45■□□□□ 0.22
USP13Q92995 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.45■□□□□ 0.22
USP13Q92995 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 MIR658-201ENST00000385210 100 ntBASIC16.45■□□□□ 0.22
USP13Q92995 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.45■□□□□ 0.22
USP13Q92995 AC022210.1-201ENST00000449856 793 ntBASIC16.45■□□□□ 0.22
USP13Q92995 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.45■□□□□ 0.22
USP13Q92995 PHKG1P2-201ENST00000457537 863 ntBASIC16.45■□□□□ 0.22
USP13Q92995 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.45■□□□□ 0.22
USP13Q92995 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
USP13Q92995 AC010319.3-201ENST00000597028 470 ntBASIC16.45■□□□□ 0.22
USP13Q92995 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.45■□□□□ 0.22
USP13Q92995 REXO1L1P-202ENST00000608646 1974 ntBASIC16.45■□□□□ 0.22
USP13Q92995 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
USP13Q92995 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
USP13Q92995 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
USP13Q92995 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
USP13Q92995 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 AL513477.1-201ENST00000602865 2407 ntBASIC16.45■□□□□ 0.22
USP13Q92995 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP13Q92995 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP13Q92995 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP13Q92995 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
USP13Q92995 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
USP13Q92995 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.44■□□□□ 0.22
USP13Q92995 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
USP13Q92995 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP13Q92995 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.44■□□□□ 0.22
USP13Q92995 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.44■□□□□ 0.22
USP13Q92995 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP13Q92995 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP13Q92995 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
USP13Q92995 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.44■□□□□ 0.22
USP13Q92995 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
USP13Q92995 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms