Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.65■□□□□ 0.42
USP6NLQ92738 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP6NLQ92738 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP6NLQ92738 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
USP6NLQ92738 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
USP6NLQ92738 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.65■□□□□ 0.42
USP6NLQ92738 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.65■□□□□ 0.42
USP6NLQ92738 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP6NLQ92738 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.65■□□□□ 0.42
USP6NLQ92738 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.65■□□□□ 0.42
USP6NLQ92738 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.65■□□□□ 0.42
USP6NLQ92738 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.65■□□□□ 0.42
USP6NLQ92738 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.65■□□□□ 0.42
USP6NLQ92738 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.65■□□□□ 0.42
USP6NLQ92738 AC015967.2-201ENST00000624092 234 ntBASIC17.65■□□□□ 0.42
USP6NLQ92738 AC006435.4-201ENST00000625037 234 ntBASIC17.65■□□□□ 0.42
USP6NLQ92738 AL356737.1-201ENST00000634391 234 ntBASIC17.65■□□□□ 0.42
USP6NLQ92738 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP6NLQ92738 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.65■□□□□ 0.42
USP6NLQ92738 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP6NLQ92738 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP6NLQ92738 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP6NLQ92738 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
USP6NLQ92738 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP6NLQ92738 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
USP6NLQ92738 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USP6NLQ92738 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
USP6NLQ92738 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.64■□□□□ 0.42
USP6NLQ92738 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6NLQ92738 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6NLQ92738 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
USP6NLQ92738 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6NLQ92738 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
USP6NLQ92738 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6NLQ92738 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.64■□□□□ 0.41
USP6NLQ92738 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6NLQ92738 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6NLQ92738 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
USP6NLQ92738 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.64■□□□□ 0.41
USP6NLQ92738 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.64■□□□□ 0.41
USP6NLQ92738 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
USP6NLQ92738 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6NLQ92738 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP6NLQ92738 CNN2P10-201ENST00000443067 918 ntBASIC17.64■□□□□ 0.41
USP6NLQ92738 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
USP6NLQ92738 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.64■□□□□ 0.41
USP6NLQ92738 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
USP6NLQ92738 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.64■□□□□ 0.41
USP6NLQ92738 RN7SL48P-201ENST00000579283 293 ntBASIC17.64■□□□□ 0.41
USP6NLQ92738 MIR3619-201ENST00000579667 83 ntBASIC17.64■□□□□ 0.41
USP6NLQ92738 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.64■□□□□ 0.41
USP6NLQ92738 AC020914.3-201ENST00000594712 304 ntBASIC17.64■□□□□ 0.41
USP6NLQ92738 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.64■□□□□ 0.41
USP6NLQ92738 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6NLQ92738 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.64■□□□□ 0.41
USP6NLQ92738 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.64■□□□□ 0.41
USP6NLQ92738 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
USP6NLQ92738 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.64■□□□□ 0.41
USP6NLQ92738 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6NLQ92738 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
USP6NLQ92738 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
USP6NLQ92738 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USP6NLQ92738 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USP6NLQ92738 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.64■□□□□ 0.41
USP6NLQ92738 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
USP6NLQ92738 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
USP6NLQ92738 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.63■□□□□ 0.41
USP6NLQ92738 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP6NLQ92738 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP6NLQ92738 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP6NLQ92738 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.63■□□□□ 0.41
USP6NLQ92738 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP6NLQ92738 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.63■□□□□ 0.41
USP6NLQ92738 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP6NLQ92738 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
USP6NLQ92738 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP6NLQ92738 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.63■□□□□ 0.41
USP6NLQ92738 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP6NLQ92738 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
USP6NLQ92738 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
USP6NLQ92738 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP6NLQ92738 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP6NLQ92738 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
USP6NLQ92738 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.63■□□□□ 0.41
USP6NLQ92738 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
USP6NLQ92738 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
USP6NLQ92738 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP6NLQ92738 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.63■□□□□ 0.41
USP6NLQ92738 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USP6NLQ92738 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.63■□□□□ 0.41
USP6NLQ92738 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.63■□□□□ 0.41
USP6NLQ92738 KLF2P2-201ENST00000416807 1039 ntBASIC17.63■□□□□ 0.41
USP6NLQ92738 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.63■□□□□ 0.41
USP6NLQ92738 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP6NLQ92738 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.63■□□□□ 0.41
USP6NLQ92738 CHMP4BP1-201ENST00000556017 588 ntBASIC17.63■□□□□ 0.41
USP6NLQ92738 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.63■□□□□ 0.41
USP6NLQ92738 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USP6NLQ92738 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.63■□□□□ 0.41
USP6NLQ92738 ECM1P1-201ENST00000604092 1279 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms