Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.98□□□□□ -0.01
TTC9Q92623 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9Q92623 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9Q92623 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9Q92623 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.98□□□□□ -0.01
TTC9Q92623 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.98□□□□□ -0.01
TTC9Q92623 AC007551.1-201ENST00000457394 519 ntBASIC14.98□□□□□ -0.01
TTC9Q92623 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.98□□□□□ -0.01
TTC9Q92623 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9Q92623 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9Q92623 ZNF767P-206ENST00000513792 565 ntBASIC14.98□□□□□ -0.01
TTC9Q92623 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.98□□□□□ -0.01
TTC9Q92623 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9Q92623 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.98□□□□□ -0.01
TTC9Q92623 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.98□□□□□ -0.01
TTC9Q92623 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.98□□□□□ -0.01
TTC9Q92623 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.98□□□□□ -0.01
TTC9Q92623 AC243960.2-201ENST00000600996 747 ntBASIC14.98□□□□□ -0.01
TTC9Q92623 AL022328.1-201ENST00000610050 478 ntBASIC14.98□□□□□ -0.01
TTC9Q92623 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.98□□□□□ -0.01
TTC9Q92623 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TTC9Q92623 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9Q92623 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
TTC9Q92623 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9Q92623 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TTC9Q92623 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9Q92623 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.98□□□□□ -0.01
TTC9Q92623 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TTC9Q92623 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TTC9Q92623 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
TTC9Q92623 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.97□□□□□ -0.01
TTC9Q92623 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TTC9Q92623 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
TTC9Q92623 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TTC9Q92623 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.97□□□□□ -0.01
TTC9Q92623 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.97□□□□□ -0.01
TTC9Q92623 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.97□□□□□ -0.01
TTC9Q92623 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.97□□□□□ -0.01
TTC9Q92623 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.97□□□□□ -0.01
TTC9Q92623 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.97□□□□□ -0.01
TTC9Q92623 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.97□□□□□ -0.01
TTC9Q92623 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.97□□□□□ -0.01
TTC9Q92623 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.97□□□□□ -0.01
TTC9Q92623 MIR5189-201ENST00000577370 114 ntBASIC14.97□□□□□ -0.01
TTC9Q92623 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.97□□□□□ -0.01
TTC9Q92623 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.97□□□□□ -0.01
TTC9Q92623 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TTC9Q92623 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.97□□□□□ -0.01
TTC9Q92623 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TTC9Q92623 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.97□□□□□ -0.01
TTC9Q92623 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TTC9Q92623 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 REXO1L8P-201ENST00000604378 1897 ntBASIC14.97□□□□□ -0.01
TTC9Q92623 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
TTC9Q92623 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.97□□□□□ -0.01
TTC9Q92623 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TTC9Q92623 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TTC9Q92623 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9Q92623 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.96□□□□□ -0.01
TTC9Q92623 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.96□□□□□ -0.01
TTC9Q92623 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.96□□□□□ -0.01
TTC9Q92623 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.96□□□□□ -0.01
TTC9Q92623 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TTC9Q92623 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TTC9Q92623 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.96□□□□□ -0.01
TTC9Q92623 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.96□□□□□ -0.01
TTC9Q92623 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9Q92623 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TTC9Q92623 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9Q92623 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TTC9Q92623 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9Q92623 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TTC9Q92623 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms